Bioconductor Gage package

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gage package gage

5.9 years ago melkile26 • 0

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1.2k

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gage gage package gene expression matrix gene set analysis

5.9 years ago atakanekiz ▴ 30

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2.8k

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gage package error

updated 6.1 years ago by James W. MacDonald 66k • written 6.1 years ago by Miskey, Csaba ▴ 20

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3.7k

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gage gage package pathview rna-seq

updated 2.3 years ago by Helen • 0 • written 6.3 years ago by tarun2 • 0

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1.8k

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kegg geneset genelist gage package

updated 6.8 years ago by Gordon Smyth 51k • written 6.8 years ago by sup230 ▴ 30

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1.5k

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gage package deseq2

6.9 years ago sup230 ▴ 30

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1.6k

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gage gage package

updated 7.6 years ago by Luo Weijun ★ 1.6k • written 7.7 years ago by Michael • 0

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1.5k

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R gage package rnaseq pathview

7.8 years ago joanito.liberti • 0

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957

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gage package path.ids RNA-Seq

7.9 years ago rl1385 • 0

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936

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t-test GAGE package Kolmogorov-Smirnov test Gene-Set enrichment

8.0 years ago smt8n • 0

10 results • Page 1 of 1

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Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k

I think Guido already answered this question.

Answer: biomaRt has encountered an unknown server error while using getLDS by miriam.lloriansopena • 0

This has worked very well for me. Thank you for your help!!

Answer: biomaRt has encountered an unknown server error while using getLDS by Mike Smith ★ 6.5k

There's a lot to unpack here! First, unfortunatley the getLDS funciontallity started failing with the release of BioMart 106. I've aske…

Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0

Well, I was looking at the result table (enrich18k@result, or yy@result in your example), and it gives every pathway even the non-significa…

Comment: Trouble reading samplesheet in with diffbind to create dba by Mallory • 0

Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …

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Answer: biomaRt has encountered an unknown server error while using getLDS

A: limma: comparison of repeat measurements - blocking or within-subject correlatio

A: dream vignette says limma-voom repeated measures two-group comparison needs two

Answer: Get the latest gene name from Entrez ID

Get the latest gene name from Entrez ID

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Popular Question to Alejandro Reyes ★ 1.9k